Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Nicotiana tabacum

CDS Sequence

CDS ID	lcl\|NW_015899593.1_cds_XP_016449580.1_44112
CDS Infomation	[gene=LOC107774542] [db_xref=GeneID:107774542] [protein=probable RNA-dependent RNA polymerase 5] [protein_id=XP_016449580.1] [location=join(5747..6167,7969..8185,8267..8402,8651..8725,8884..9037,9946..10147,10237..10324,10512..10652,11095..11169,11298..11369,11527..11633,11768..11916,12338..12563,13340..13565,13803..13945,14529..14700,14818..14956,15039..15202,15678..15953)] [gbkey=CDS]
Sequence	ATGGGAGATTTTTACTCTTACAATAATGAAGAAGTAGTAGAAGAAGTGATTAAACTTCCA CCTTCAGTAGAACAAATGCTAAACCAAATCTGCAAAAATCAGAGACAAAATCCAATAGAT GAAAAAGTGCGAAGACTTCTTTTATCAATCGGAGAAGAAGGTTCACTTGATATTTTGAGT AAAATCTCAGTTTGTCAAATTAAAAAAACACTCAGTGGATTTATTGTATTTATGGCAAAA AAATATTATCAGTCCGAAACTCAACAGTTTTATCAGCAAACTCCAGTTTCATCTGCTGAA AGTTTTTTTCAGTCTCCTCAAATTCAAAGGATTTCTCTTTCTTCTCCAAATTCTTCTTCT TCTTCAGTAAATTTTTCTCCTAGAAATGGGCCACTTTTTCAGGCTACTGTTCATAATAAT GACATAGTCGGTGATGGATCTGATTCTCCAACATCTGCTCCACAAATGCTATCACCTCCA ACAAGTCCCGAAAGAACAAACTTTCGAAGAGATAGTCATGATCCTATGCCATCTGAATAT AGAAACAGGGCTGGCATACAAGGAATAAGCAAACAGTTGCTGGCACTCAGTAATCTTGAG TTCAGGAAATTATTTTTGATTCTACACTACATTGGAAGGAGGAAGTTGGAGGATGTCATC ATGCTTCATGATGTCGGTGAAATTTTGGATATGACATGTCAACCTATGGCTCATTTTGAG TCATATATTTGGACTAAATATGGTCATCTTTGTGAAAATGTTAAACGGGTGCAGTATCTT GATTGGGATTCCGGAAGGAGTCATTTCTATCATTGCCATGTTTATTCGGATGGAAGCTAT GCTTTTAAGGGTCCTTACCTGAAAGCAGAAAGAACCCATCTACAACAGTCATTAGGAGAT GAAAATATATTGGTTGTCAGGTTTATGGAAGAAGCCCCAAGGTGTCCACAAGAGATTGTT AAGAATGGAATTCTTATTGGTTTGAGGCGCTATCACTTTTTTGTTTATAAGGATGATGGG AAGAAGAAAAATTCAATGGACAAAGAGGAAAAGATCGATACAGTCAAATGCTACTTTGTT CGAATGGAATCTCTTAATCCTTATGAAAATTTAACTTACATTTTGTACGACAAGATAGTC CACAAAGCAAGGTGTCGTTTCATGCATGTACATATGGTCTCTAGCATGGCTAAATACATG GCCAGGTTCTCCCTAATTTTATCCACGACAGTAAAGCTTCAAGTTGATCTGAATTCAGTG AATATTGACAGAATTGAAGATATATATTGTCATGACAAGAATGGACGTACTCTCTATGAC GAAGATGGAAAACCCCTTATACACACAGATGGGACAGGATATATTTCGGAAGATTTGGCA AGAAAGTGTCCACAAGATTTTTTCAATGTGAAGTATAAGAATGCCAAGTTAGAGAGATAT TCCAATGGTGTTGAACCTGGGGAGAATTCATCCGAGGTGGGAGAGGCAGAATTTCAGAGT GGGGAACCGCCTTTGTTAATGCAGTGCCGTCTATTCTACAATGGTCTTGCTGTAAAGGGA ACCCTTCTAGTCAATAGAAAGCTGCCACGGTGCACGATTCAGATTAGGCCTTCAATGATC AAGGTTGAGGCTGACCCAAAATTGTCAAGAACTCGAATGTTTAACTCGCTGGAAATAGTT ACACCTAGTTTTAAACCTCGGAATACTTATCTATCAAGAACTCTTATTGCTCTGTTGACC TATGGAGGTGTTCCGGCAGAGTATTTCTTTGATATACTGAATAACACTTTGGAGGAGACA CAAAGGTTATACTCAGATGAGGTGACAGCACTAAAAGTTGCAGCGAACCATAGAGATCGT GATGATGCCTCTATTGCCACGGGTATGATAATGGCTGGAGTACCTCTCTGTGAACCGTAT CTTAGGTGTTGCTTATCTTCCTTGGCAAAGGAAGAAAGAAATGGGCTAAAAGGAGGAAAA CTTCCTATCTCTGATACTTTCTATTTAATGGGGACAGCTGATCCGACGGATACTTTAAAT CCTAATGAAGTCTGTGTTATTCTTGAACACGGACAGATATCTGGAGAGGTACTAGTATAC AGGAATCCCGGACTTCATTTTGGTGATATCCACAGACTACTTGCTGTCCCAGTGAAGAAC CTCGGTGACGTAGTTGGAAATGCTAAATATGGAATATTTTTCTCGACCAAAGGTCCAAGA TCTGCAGCCACTGAAATTGCTAATGGCGATTTTGATGGAGATAAATATTGGGTCTCTCAA AACCCCCAGCTCTTAAAATATTACCATGCAAGTAGACCGTGGTGCAGAATCCATTCAACA CCAAAGGCATTGCATAGGGAGCCCAAAGACTTCTCTGCCGAGGAAATGGAACATGAGCTC TTTCAGACATTCCTAGAAACTAGGATGCCAAACTATAGTATGGCTGACGCTTCTTCAAGC TGGTTGGCGCTCATGGATAGACTTCTGATGTTGAGGAAGAATAACACCACAGAGAATGAA GAGACAAAGACCATGAAAGAAAAGTTGTTTGAGTTGACTGATTTGTATTATGACGCTATA GACGCCCCCAAAAGTGGGAATAAGGTCTACATCCCGAAAAGGTTGAAAGTGGATAAGTTT CCACATTTCTTGGAAAAGAAAGAAGAGTATATCTCTACTTCAGTACTAGGAGAAATTTAT GACAGGGTTAAGTCCTTTAAAGCTGAAGCAGCAGTTGCAGTAGAAATCAAGAAACTTCCT GCTTTTGAGGTCAAAATCCCCGAGACATGCTTGAGGTTATGGGAGGAAAGGTACAAAAAG TACAGATTTGAGATGATGCAAGCGTTGAACACCAGCAGTGAATCGAAAAATGACTTAGCG GACGAGGTTGTTAAAAAGTACAAACAGTTGCTATATGAAGCGCCGGATATGGAGGAGAGT GCAAGGAGCACAACGGACATATTTAACGATGCACTTGCTATTTATCGCGTTACTTACGAT TATGCAAAGGCTATCGGAGACGTCAAAAAATGTGGTTTTGCATGGAAAGTTGCAGGTTCA GCTCTTTGTAGACTTCATGCTGAGCTTCATGCAAAAGAACATAACCAAAAAATCATGGCT GTGTCACCTTCTATATTGCACAAATTATTGAACTTGAGGAACAAAGAAGTGTCTAACAAG TAA

Peptide Sequence

PEP ID	XP_016449580.1
PEP Infomation	PREDICTED: probable RNA-dependent RNA polymerase 5 [Nicotiana tabacum]
Sequence	MGDFYSYNNEEVVEEVIKLPPSVEQMLNQICKNQRQNPIDEKVRRLLLSIGEEGSLDILS KISVCQIKKTLSGFIVFMAKKYYQSETQQFYQQTPVSSAESFFQSPQIQRISLSSPNSSS SSVNFSPRNGPLFQATVHNNDIVGDGSDSPTSAPQMLSPPTSPERTNFRRDSHDPMPSEY RNRAGIQGISKQLLALSNLEFRKLFLILHYIGRRKLEDVIMLHDVGEILDMTCQPMAHFE SYIWTKYGHLCENVKRVQYLDWDSGRSHFYHCHVYSDGSYAFKGPYLKAERTHLQQSLGD ENILVVRFMEEAPRCPQEIVKNGILIGLRRYHFFVYKDDGKKKNSMDKEEKIDTVKCYFV RMESLNPYENLTYILYDKIVHKARCRFMHVHMVSSMAKYMARFSLILSTTVKLQVDLNSV NIDRIEDIYCHDKNGRTLYDEDGKPLIHTDGTGYISEDLARKCPQDFFNVKYKNAKLERY SNGVEPGENSSEVGEAEFQSGEPPLLMQCRLFYNGLAVKGTLLVNRKLPRCTIQIRPSMI KVEADPKLSRTRMFNSLEIVTPSFKPRNTYLSRTLIALLTYGGVPAEYFFDILNNTLEET QRLYSDEVTALKVAANHRDRDDASIATGMIMAGVPLCEPYLRCCLSSLAKEERNGLKGGK LPISDTFYLMGTADPTDTLNPNEVCVILEHGQISGEVLVYRNPGLHFGDIHRLLAVPVKN LGDVVGNAKYGIFFSTKGPRSAATEIANGDFDGDKYWVSQNPQLLKYYHASRPWCRIHST PKALHREPKDFSAEEMEHELFQTFLETRMPNYSMADASSSWLALMDRLLMLRKNNTTENE ETKTMKEKLFELTDLYYDAIDAPKSGNKVYIPKRLKVDKFPHFLEKKEEYISTSVLGEIY DRVKSFKAEAAVAVEIKKLPAFEVKIPETCLRLWEERYKKYRFEMMQALNTSSESKNDLA DEVVKKYKQLLYEAPDMEESARSTTDIFNDALAIYRVTYDYAKAIGDVKKCGFAWKVAGS ALCRLHAELHAKEHNQKIMAVSPSILHKLLNLRNKEVSNK

Transcript Sequence

Gene sequence data has not been registered.